NEWS
gggenes 0.7.0.9000
gggenes 0.7.0 (2026-07-05)
New features
geom_subgene_arrow() and geom_subgene_label() now support polar
coordinates.
Minor improvements and fixes
- gggenes now validates layer input and reports problems with clearer, more
consistent error messages (#91, #92).
- gggenes now transforms data coordinates once per panel rather than once per
glyph, speeding up the rendering of layers with many glyphs (#113).
- The rendering pipeline is refactored to share more logic across geoms (#93,
#109).
- Grid drawing now uses NPC rather than native coordinates internally (#94).
- The package documentation is updated throughout, and the README now presents
polar-coordinate drawing with
coord_polar() as a supported feature rather
than as experimental (#115, #116, #117, #122).
- The declared dependency floors are now honest:
ggplot2 (>= 3.4.0) for the
linewidth aesthetic, rlang (>= 1.0.0) for rlang::caller_arg(), and
ggfittext (>= 0.9.0) for polar-coordinate text fitting (#107).
geom_feature() and geom_terminator() now document that their linewidth
is expressed in points rather than millimetres, unlike geom_gene_arrow() and
the ggplot2 convention; this inconsistency will be reconciled when these geoms
are superseded in gggenes 1.0.0 (#121).
geom_feature_label() now draws when the forward aesthetic is not mapped
(#98).
geom_feature_label() now sizes the label box of a forward = TRUE feature
to the full panel in polar coordinates, spanning to the theta edge at 2 * pi
rather than to 1 radian (#112).
geom_feature_label() and geom_terminator_label() now draw on the opposite
side of the molecule with a negative feature_height or terminator_height,
and their height-parameter documentation is clarified (#90, #99).
geom_gene_arrow(), geom_subgene_arrow(), geom_feature(), and
geom_terminator() now handle the deprecated size aesthetic consistently,
each emitting a single deprecation warning (#102).
geom_gene_arrow() and geom_subgene_arrow() legend keys now apply alpha
to the outline colour as well as the fill, matching the drawn geoms (#101).
geom_gene_label() and geom_subgene_label() register the align parameter
explicitly (#104).
geom_subgene_label() now draws in polar coordinates with only its required
aesthetics mapped, without also needing xmin/xmax (#106).
- Polar segmentation now keeps the endpoint of a very short edge, so a glyph
edge shorter than one segment is drawn rather than collapsing to a single
point (#114).
make_alignment_dummies() now gives a more informative error when on is
absent from the mapped id column (#119).
gggenes 0.6.0 (2025-12-14)
Major changes
- Add new
geom_terminator() and geom_terminator_label()
- Add support for polar coordinates
Minor changes
- Deprecate the
size aesthetic in favour of linewidth (size deprecated as
of ggplot2 3.4.0)
- Use the cli package for messages, warnings etc.
gggenes 0.5.1 (2023-09-05)
Minor changes
gggenes 0.5.0 (2023-03-28)
Major changes
- Add new
geom_feature() and geom_feature_label()
- Add support for flipped coordinates with
coord_flip() (#38)
Minor changes
- Explicit coercion of the
forward value to logical, more useful values for
the forward aesthetic in example data, and fix an error in README and
introductory vignette (-1 does not coerce to FALSE...)
- Improve handling of NA
id values in make_alignment_dummies() (#51, thanks
@NanamiKubota)
- Update
element_line to use linewidth rather than size (size deprecated
as of ggplot2 3.4.0)
Bug fixes
- Fix bug where
height argument to geom_gene_label() and
geom_subgene_label() were being ignored (#40, thanks @jvanbelzen)
gggenes 0.4.1 (2020-12-10)
Minor changes
- More useful example for the
forward aesthetic in the README and
example_genes (thanks @rickbeeloo)
Bug fixes
- Fix bug in checking position of subgenes relative to the parent gene (#21,
thanks @mchiapello)
- Add 'orientation' column to
example_subgenes and correct some errors in the
documentation for both example data frames
- Make vdiffr tests conditional
gggenes 0.4.0 (2019-06-24)
Major changes
- Add new
geom_subgene_arrow() (contributed by @zdk123)
- Add new
geom_subgene_label()
- Support new version of ggfittext (0.8.0)
Bug fixes
- Fix failing visual tests
- Fix space in figure file name
- Replace
expect_error with the more reliable expect_silent in tests
- Fix bugs in several tests
- Add visual testing with vdiffr
- Misc. small bug fixes and typo corrections
- Fix compatibility with tidyeval changes in ggplot2 v2.3.0
gggenes 0.3.1 (2018-06-16)
Bug fixes
- Now actually compatible with ggplot2 v2.3.0
gggenes 0.3.0 (2018-05-26)
Major changes
Minor changes
- Change R version dependency to fix 'patchlevel' error on CMD check
- Add support for both pre- and post- ggplot2 v2.3.0 versions of
aes()
- Edit docs and README
Bug fixes
- Remove README.html so GitHub renders README correctly
gggenes 0.2.0 (2017-08-24)
Major changes
- Remove 'dplyr' dependency
- Update documentation
- Add vignette
Bug fixes
- Fix drawing of
geom_gene_arrow()